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Alignment freeware
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Alignment

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Added: January 24, 2010 | Visits: 1.308

Bio::Graphics::Glyph::alignment Bio::Graphics::Glyph::alignment is the "alignment" glyph. SYNOPSIS See L< Bio::Graphics::Panel > and L< Bio::Graphics::Glyph >. This is identical to the "graded_segments" glyph, and is used for drawing features that consist of discontinuous segments. The color intensity of each segment is...



Platforms: *nix

License: Freeware Size: 4.7 MB Download (77): Bio::Graphics::Glyph::alignment Download

Added: June 01, 2013 | Visits: 245

M-File Alignment This collection of functions is used to clean the alignment of m-code. It arranges all programming constructs in an easily readable manner.





Platforms: Matlab

License: Freeware Size: 10 KB Download (18): M-File Alignment Download

Added: September 03, 2013 | Visits: 268

Alignment API Alignment API is a development tool that allows various ontology matchers to share the same format and interface for accessing matching results. Using ontologies is the privileged way to achieve interoperability among heterogeneous systems within the Semantic web. However, as the ontologies...


Platforms: *nix

License: Freeware Size: 32.2 MB Download (19): Alignment API Download

Added: January 14, 2010 | Visits: 872

Bio::Tools::AlignFactory Bio::Tools::AlignFactory is a base object for alignment factories. SYNOPSIS You wont be using this as an object, but using a dervied class like Bio::Tools::pSW Holds common Alignment Factory attributes in place.


Platforms: *nix

License: Freeware Size: 4.7 MB Download (138): Bio::Tools::AlignFactory Download

Added: August 02, 2010 | Visits: 1.259

Bio::Tools::Run::PiseApplication::align2model Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:...


Platforms: *nix

License: Freeware Size: 829.44 KB Download (75): Bio::Tools::Run::PiseApplication::align2model Download

Added: November 14, 2010 | Visits: 742

Uplug Uplug is a collection of tools for linguistic corpus processing, word alignment, and term extraction from parallel corpora. Several tools have been integrated in Uplug. Pre-processing tools include a sentence splitter, tokenizer, and external part-of-speech tagger and shallow parsers. The...


Platforms: *nix

License: Freeware Size: 21.9 MB Download (91): Uplug Download

Added: February 01, 2010 | Visits: 978

Algorithm::NeedlemanWunsch Algorithm::NeedlemanWunsch is a sequence alignment with configurable scoring. SYNOPSIS use Algorithm::NeedlemanWunsch; sub score_sub { if (!@_) { return -2; # gap penalty } return ($_[0] eq $_[1]) ? 1 : -1; } my $matcher = Algorithm::NeedlemanWunsch->new(&score_sub); my $score =...


Platforms: *nix

License: Freeware Size: 10.24 KB Download (86): Algorithm::NeedlemanWunsch Download

Released: June 21, 2012  |  Added: June 21, 2012 | Visits: 334

Open3DALIGN x64 Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is...


Platforms: Windows

License: Freeware Size: 5.2 MB Download (51): Open3DALIGN x64 Download

Released: September 10, 2012  |  Added: September 10, 2012 | Visits: 269

Jalview Jalview is used widely in a variety of web pages but is available as a general purpose alignment editor. for WindowsAll


Platforms: Windows

License: Freeware Download (56): Jalview Download

Released: November 04, 2012  |  Added: November 04, 2012 | Visits: 276

UGENE UGENE is a comprehensive genome analysis suite that features multiple sequence alignment and a complex HMM builder and search module. for WindowsAll


Platforms: Windows

License: Freeware Download (72): UGENE Download

Released: August 04, 2012  |  Added: August 04, 2012 | Visits: 267

Open3DALIGN for Mac OS X Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is...


Platforms: Mac

License: Freeware Size: 3.6 MB Download (54): Open3DALIGN for Mac OS X Download

Released: June 03, 2012  |  Added: June 03, 2012 | Visits: 257

Open3DALIGN Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is...


Platforms: Windows

License: Freeware Size: 4.1 MB Download (53): Open3DALIGN Download

Released: August 07, 2012  |  Added: August 07, 2012 | Visits: 257

Open3DALIGN for Linux Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is...


Platforms: Linux

License: Freeware Size: 3.3 MB Download (50): Open3DALIGN for Linux Download

Released: September 26, 2012  |  Added: September 26, 2012 | Visits: 270

AstroTortilla AstroTortilla is a project for automating repeating astrophotography tasks, such as equatorial mount, polar alignment and target centering. The application does that by integrating existing instruments and especially plate solving to the ASCOM telescope control interface.


Platforms: Windows, 2K, XP, Windows Vista, 7

License: Freeware Download (57): AstroTortilla Download

Released: November 24, 2012  |  Added: November 24, 2012 | Visits: 300

FP-WindowManager Offers tools to easily manage windows, including automatic alignment and sizing, pinning and unpinning (set on top), shortcuts to stack and view side by side and shortcuts to change size and position. FEATURES: · automatic window alignment and sizing · pin and unpin windows · stack all...


Platforms: Windows

License: Freeware Download (57): FP-WindowManager Download

Added: May 10, 2013 | Visits: 367

Image Picker Features - Configurable alignment options - Support for Lightbox2 - My Imagepicker tab in My Account - Paging for the image browser - Additional configuration options on the settings page - Upload an image - Automatically generate thumbnails - Specify the size of both your thumbnail and resized...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

License: Freeware Download (30): Image Picker Download

Added: October 10, 2013 | Visits: 234

MISFITS MISFITS is a program to evaluate the goodness of fit of a model to an alignment in phylogeny reconstruction. It offers a look back at the alignment to pinpoint to site patterns that do not fit to the model and the resulting tree (thereafter referred to as the tree-model). MISFITS then introduces...


Platforms: Mac

License: Freeware Size: 225.28 KB Download (16): MISFITS Download

Added: August 21, 2013 | Visits: 272

FSA For Linux FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences.


Platforms: *nix

License: Freeware Size: 9.61 MB Download (22): FSA For Linux Download

Added: August 17, 2008 | Visits: 1.277

Polar View This is a simple program that displays a map of the north celestial pole, it can be configured to show the same view as your polar alignment telescope. PolarView's main purpose is for accurate polar alignment in the field. All good astronomers will know that the pole star 'Polaris' or the 'North...


Platforms: Windows

License: Freeware Size: 74 KB Download (140): Polar View Download

Added: August 12, 2008 | Visits: 1.259

Q & A Q & A is a flashcard program that is simple to use yet customizable in terms of font, color, and alignment. It includes helpful features such as an intuitive deck editing mode, deck shuffle option, and the ability to import and export decks so you can share decks that you have created with...


Platforms: Windows

License: Freeware Size: 744 KB Download (190): Q & A Download

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